Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015913609.1_cds_XP_016463661.1_56765
CDS Infomation

[gene=LOC107786660] [db_xref=GeneID:107786660] [protein=WRKY transcription factor SUSIBA2-like] [protein_id=XP_016463661.1] [location=join(43542..43901,45253..45330,52006..52715,52865..53023,53149..53644)] [gbkey=CDS]
Sequence

ATGGAAAGAAATATTGGAGAGCCTACTGATGACTGGAATTCTCAAATTGTTGGAAATTTG
GACTCAGAAACAATGTTAGATACTCAAGAAAGTGATGTAAAAATTGAAGAAAGAAGTGGA
AATACAGAAAATGGGAGTTTATTTCCCAATAATAATAATAAGCGCAGTAGCATTGCGGAG
CGCCGGGCAGCAAAATGTGGTTTCAATGCGTCTACCATTAGTATAGCCCGGTTTAGGGTT
ACAACTACAAGTATGCCGGAGATGTCGCCGCCAACGGCTCGGCCAACTTTTCTGACAATA
CCTCCGGGACTAACTCCGGCAGCATTGCTCGACTCTCCTGTTATGCTCCCAAATTCACTG
GCACCACAATCTCCAACCACTGGAAGCTTTCACTTCTCCAATATCAATCAAGAAAACAGA
ATGAAGAGTACTCCTCAGATAGCAAGAGATCATTTTGAATTCCCAGTGGAATCTCCAAAA
GCGACTGCCTTAAAGAACTGCAGCCGAGAAACAAATGTTGGACAAAACATGAGCTGCATT
GGCTTAACAAATATTCATGAGTCAGGAAATTGCACCAGAAGAGCAAACCAATATGAGCAA
AGAAGTAATAATATTACTCCTAACGGTTCAGATGATGGATACACTTGGAGAAAATATGGG
CAGAAACATGTAAAAGGGAGTGAATTTCCAAGGAGTTATTACAAATGTACTCAACAAAAT
TGCCCTGTTAAGAAAAAAGTTGAACGTTCTCCAGATGGACAGATAACAGAAATTGTGTAC
AAAGGCGCACATAATCATCATAAATCTCAGCCTCCTCGACGTGCAACAATGAGTTCAACT
GCCTATGGTTTGGGAGAAATGAGTGAAGGAAATATTGGTGGATCAAATAGTTGGCAATTT
GGAAGAAATAAGGATGTTAGAGCTCCTTCAGGTCTGGACAGAACATCCTCTGCATCTGTT
TTGACAGATGTCTCTGATTCATTAATGTTAAATTATCAAAACACCAATATGAATGCGTTT
GAATCAGCTACTCCTGAGCCTTCTTCTACGCTTGCTAGTCGTGATGATGAAGACGAAGAT
AGAGCTACTGAAGGGAGCACTTCGCTTGGTGATGATGTTGATGATTATGCATTTGACCAT
AAAAGAAGGAGGAGAGAATTTTACTCAGCTGAAACGAGTTTATCGTCGAGGACAGCAAGA
GAACCAAGAGTAGTTGTCCAGATAGAGAGCGAGATCGATATTCTTGATGATGGTTATCGC
TGGAGAAAATATGGCCAAAAAGTTGTTAAGGGAAATCCAAATCCCAGGAGCTATTACAAA
TGCACAAGTGCAGGATGTCCAGTAAGAAAGCATGTGGAAAGGGCTCCAGATAACCTAAAG
TCAGTCATCACAACATATGAAGGAAAACATAACCATGAAGTGCCTTCAGCAAACAAGACA
AACTGTGCTATTTCTGGAAACCAAGCTTTAACTTCTACTTCAAAACCCCATAAAGTTTCC
AATTCAGGAATGCAGGTTCAAGATTGTAATAGAAAGCCCTTTGACTATGTAAGAATAGGA
GCTGCTTCATCTATATATGACCTGAAATTCCCAACTAATTTACGCAGCAGCCCTTTGTCC
TACGCTTCTTTCCTTTTGAGCCCGAATCCTTTGCAGATGCCTGAATTCCCACTGCCAATG
AGTCTTCCCTTTGGCCCTAATATTGTGCCTCCTCTTGCTGGATTTCATTTTAATGCTGGT
GAGGATCAAAAGTATATATATTCACGACAACAACAAAAGTTCGAGACTAGTGAAAGGCAA
TGA

Peptide Sequence

PEP ID

XP_016463661.1
PEP Infomation

PREDICTED: WRKY transcription factor SUSIBA2-like [Nicotiana tabacum]
Sequence

MERNIGEPTDDWNSQIVGNLDSETMLDTQESDVKIEERSGNTENGSLFPNNNNKRSSIAE
RRAAKCGFNASTISIARFRVTTTSMPEMSPPTARPTFLTIPPGLTPAALLDSPVMLPNSL
APQSPTTGSFHFSNINQENRMKSTPQIARDHFEFPVESPKATALKNCSRETNVGQNMSCI
GLTNIHESGNCTRRANQYEQRSNNITPNGSDDGYTWRKYGQKHVKGSEFPRSYYKCTQQN
CPVKKKVERSPDGQITEIVYKGAHNHHKSQPPRRATMSSTAYGLGEMSEGNIGGSNSWQF
GRNKDVRAPSGLDRTSSASVLTDVSDSLMLNYQNTNMNAFESATPEPSSTLASRDDEDED
RATEGSTSLGDDVDDYAFDHKRRRREFYSAETSLSSRTAREPRVVVQIESEIDILDDGYR
WRKYGQKVVKGNPNPRSYYKCTSAGCPVRKHVERAPDNLKSVITTYEGKHNHEVPSANKT
NCAISGNQALTSTSKPHKVSNSGMQVQDCNRKPFDYVRIGAASSIYDLKFPTNLRSSPLS
YASFLLSPNPLQMPEFPLPMSLPFGPNIVPPLAGFHFNAGEDQKYIYSRQQQKFETSERQ

Transcript Sequence

Gene sequence data has not been registered.